Pathology Specimen Handbook

Recent changes for all departments


 Recent changes for AMIKACIN

Recent changes for AMIKACIN
DateFieldChanged FromChanged To
29th October 2024Collection & Request InstructionsMedication Profile

Medication Profile

Notify the laboratory if the test is urgent as this test is now referred to an external provider.

 Recent changes for ANTI GBM ANTIBODIES

Recent changes for ANTI GBM ANTIBODIES
DateFieldChanged FromChanged To
16th December 2024Request GroupGBMGBM2
Volume (Adults)5 mL3 mL
Minimum/Paediatric Volume0.80 mL0.60 mL
FrequencyWeeklyThrice weekly

 Recent changes for ANTI HEAT SHOCK PROTEIN 70 ANTIBODIES

Recent changes for ANTI HEAT SHOCK PROTEIN 70 ANTIBODIES
DateFieldChanged FromChanged To
18th March 2025Volume (Adults)5 mLnull mL
Minimum/Paediatric Volume2 mLnull mL
Preferred Specimen TypeBloodTest Not Available
Preferred Container TypeSerum - Gel tube - Contains Clot ActivatorTest Not Available
Collection & Request Instructions

Please note that this test is no longer available. 

FrequencyOn requestNot applicable

 Recent changes for BCR ABL TRANSLOCATION GENE REARRANGEMENT

Recent changes for BCR ABL TRANSLOCATION GENE REARRANGEMENT
DateFieldChanged FromChanged To
28th February 2025Collection & Request Instructions

PAXgene collections: collect via butterflies instead of a vacutainer due to the possible backflow of liquid inside the PAXgene if a vacutainer is used. 

Collections for BCR ABL testing must be collected in a separate dedicated sterile tube and must NOT be put through any analysers. 

Tube handling must be minimized to prevent contamination.

If using a PAXgene tube also collect an additional 9mL EDTA whole blood sample. If PAXgene tubes are not available then collect only 1 x 9mL EDTA tube.

Test must be performed within 48 hours of specimen collection. Do not collect blood or bone marrow for this test on days preceding public holidays. Collections on Fridays or days preceeding a public holiday must arrive at the Clayton laboratory by 12pm. Samples collected after 12pm on a Friday or a day preceeding a public holiday or on a Saturday will not be accepted.

Test requests for rare translocations are referred to SA Pathology and these samples must be accompanied by a completed referral form, link below:

https://www.sapathology.sa.gov.au/testcatfiles/PUB-0556.pdf

 

 

Collections for BCR ABL testing must be collected in a separate dedicated sterile tube and must NOT be put through any analysers. 

Tube handling must be minimized to prevent contamination.

If using a PAXgene tube also always collect an additional 9mL EDTA whole blood sample.

If PAXgene tubes are not available then collect only 1 x 9mL EDTA tube.

PAXgene collections: collect via butterflies instead of a vacutainer due to the possible backflow of liquid inside the PAXgene if a vacutainer is used. 

Test must be performed within 48 hours of specimen collection. Do not collect blood or bone marrow for this test on days preceding public holidays/long weekends. Collections on Fridays or days preceding a public holiday/long weekend must arrive at the Clayton laboratory by 12pm. Samples collected after 12pm on a Friday or a day preceding a public holiday/long weekend or on a Saturday will not be accepted.

Test requests for rare translocations are referred to SA Pathology and these samples must be accompanied by a completed referral form, link below:

https://www.sapathology.sa.gov.au/testcatfiles/PUB-0556.pdf

 

 

26th February 2025Volume (Adults)3 mL9 mL
Preferred Container TypePAXgene (Blood RNA)
EDTA Bone Marrow
EDTA Whole Blood
EDTA Bone Marrow
PAXgene (Blood RNA)
Optional Container TypeEDTA Whole Blood
19th February 2025Collection & Request Instructions

PAXgene collections: collect via butterflies instead of a vacutainer due to the possible backflow of liquid inside the PAXgene if a vacutainer is used. 

Collections for BCR ABL testing must be collected in a separate dedicated sterile tube and must NOT be put through any analysers. 

Tube handling must be minimized to prevent contamination.

If using a PAXgene tube also collect an additional 9mL EDTA whole blood sample. If PAXgene tubes are not available then collect 1 x 9mL EDTA tube.

Test must be performed within 48 hours of specimen collection. Do not collect blood or bone marrow for this test on days preceding public holidays. Collections on Fridays or days preceeding a public holiday must arrive at the Clayton laboratory by 12pm. Samples collected after 12pm on a Friday or a day preceeding a public holiday or on a Saturday will not be accepted.

Test requests for rare translocations are referred to SA Pathology and these samples must be accompanied by a completed referral form, link below:

https://www.sapathology.sa.gov.au/testcatfiles/PUB-0556.pdf

 

 

PAXgene collections: collect via butterflies instead of a vacutainer due to the possible backflow of liquid inside the PAXgene if a vacutainer is used. 

Collections for BCR ABL testing must be collected in a separate dedicated sterile tube and must NOT be put through any analysers. 

Tube handling must be minimized to prevent contamination.

If using a PAXgene tube also collect an additional 9mL EDTA whole blood sample. If PAXgene tubes are not available then collect only 1 x 9mL EDTA tube.

Test must be performed within 48 hours of specimen collection. Do not collect blood or bone marrow for this test on days preceding public holidays. Collections on Fridays or days preceeding a public holiday must arrive at the Clayton laboratory by 12pm. Samples collected after 12pm on a Friday or a day preceeding a public holiday or on a Saturday will not be accepted.

Test requests for rare translocations are referred to SA Pathology and these samples must be accompanied by a completed referral form, link below:

https://www.sapathology.sa.gov.au/testcatfiles/PUB-0556.pdf

 

 

4th February 2025Collection & Request Instructions

PAXgene collections: collect via butterflies instead of a vacutainer due to the possible backflow of liquid inside the PAXgene if a vacutainer is used. 

Collections for BCR ABL testing must be collected in a separate dedicated sterile tube and must NOT be put through any analysers. 

Tube handling must be minimized to prevent contamination.

If using a PAXgene tube also collect an additional 9mL EDTA whole blood sample. If PAXgene tubes are not available then collect 1 x 9mL EDTA tube.

Test must be performed within 48 hours of specimen collection. Do not collect blood or bone marrow for this test on days preceding public holidays. Collections on Fridays must arrive at the Clayton laboratory by 2pm and samples collected after this or on a Saturday will not be accepted.

Test requests for rare translocations are referred to SA Pathology and these samples must be accompanied by a completed referral form, link below:

https://www.sapathology.sa.gov.au/testcatfiles/PUB-0556.pdf

 

 

PAXgene collections: collect via butterflies instead of a vacutainer due to the possible backflow of liquid inside the PAXgene if a vacutainer is used. 

Collections for BCR ABL testing must be collected in a separate dedicated sterile tube and must NOT be put through any analysers. 

Tube handling must be minimized to prevent contamination.

If using a PAXgene tube also collect an additional 9mL EDTA whole blood sample. If PAXgene tubes are not available then collect 1 x 9mL EDTA tube.

Test must be performed within 48 hours of specimen collection. Do not collect blood or bone marrow for this test on days preceding public holidays. Collections on Fridays or days preceeding a public holiday must arrive at the Clayton laboratory by 12pm. Samples collected after 12pm on a Friday or a day preceeding a public holiday or on a Saturday will not be accepted.

Test requests for rare translocations are referred to SA Pathology and these samples must be accompanied by a completed referral form, link below:

https://www.sapathology.sa.gov.au/testcatfiles/PUB-0556.pdf

 

 

 Recent changes for BRODIFACOUM (RAT POISON WARFARIN) ASSAY

Recent changes for BRODIFACOUM (RAT POISON WARFARIN) ASSAY
DateFieldChanged FromChanged To
24th March 2025Alternative namesWARFARIN ASSAY
Minimum/Paediatric Volumenull mL

 Recent changes for CD62L

Recent changes for CD62L
DateFieldChanged FromChanged To
20th February 2025Volume (Adults)9 mL6 mL
Minimum/Paediatric Volume9 mL6 mL
Collection & Request Instructions

Tuesdays early mornings only.

Specimen must be collected by 8.30am and sent immediately to Pathology Reception for courier to reach The Royal Children's Hospital before 11am on Tuesdays only. 

This is a time critical test. Please liaise with the immunopathologist on-call before ordering or collection. 

Tuesday early morning only.

 

 Recent changes for CEFAZOLIN

Recent changes for CEFAZOLIN
DateFieldChanged FromChanged To
28th March 2025FrequencyOn requestDaily

 Recent changes for Exome Sequencing

Recent changes for Exome Sequencing
DateFieldChanged FromChanged To
9th December 2024Assay nameExome Sequencing (VCGS)Exome Sequencing
Alternative namesEXOME

 Recent changes for Familial Mediterranean Fever

Recent changes for Familial Mediterranean Fever
DateFieldChanged FromChanged To
20th February 2025Volume (Adults)3 mL4 mL
Collection & Request Instructions

Collect 1 x 3mL EDTA Blood

Collect 1 x 8mL EDTA Blood

 Recent changes for Genomics Sequencing - Acute Care Genomics

Recent changes for Genomics Sequencing - Acute Care Genomics
DateFieldChanged FromChanged To
9th December 2024Assay nameExome Sequencing - Acute Care GenomicsGenomics Sequencing - Acute Care Genomics
Volume (Adults)null mL
Minimum/Paediatric Volumenull mL
9th December 2024Volume (Adults)null mL
Minimum/Paediatric Volumenull mL
9th December 2024Request GroupGMPTRANMISCGEN
Volume (Adults)null mL
Minimum/Paediatric Volumenull mL

 Recent changes for HELICOBACTER PYLORI SEROLOGY

Recent changes for HELICOBACTER PYLORI SEROLOGY
DateFieldChanged FromChanged To
13th January 2025Volume (Adults)null mL
Minimum/Paediatric Volumenull mL
FrequencyDailyNot applicable

 Recent changes for HEPATITIS A SEROLOGY

Recent changes for HEPATITIS A SEROLOGY
DateFieldChanged FromChanged To
13th January 2025Request GroupHEPAG2,HEPAGM2HEPAG2, HEPAGM2
Collection & Request Instructions

All serology tests require a dedicated serum tube

 

Hepatitis A Total Antibody (Immunity Screen):

Retesting is not required within 7 days or if IgG has previously been detected.

 Recent changes for HUNTINGTONS DISEASE DNA STUDIES (Confirmation of clinical diagnosis of a symptomatic patient)

Recent changes for HUNTINGTONS DISEASE DNA STUDIES (Confirmation of clinical diagnosis of a symptomatic patient)
DateFieldChanged FromChanged To
9th December 2024Collection & Request Instructions

The test does not need a consent form if ordered by a clinical geneticist or a neurologist when the test is for confirmation.

9th December 2024Alternative namesHTT, HD, huntingtons chorea, huntingtons CAG repeat analysis

 Recent changes for INTERLEUKIN-6

Recent changes for INTERLEUKIN-6
DateFieldChanged FromChanged To
27th March 2025Request GroupMISCIMTest no longer available
Preferred Specimen TypeBloodTest Not Available
Preferred Container TypeSerum - Gel tube - Contains Clot ActivatorTest Not Available
Collection & Request Instructions

Request must be discussed with on-call Immunologist prior to collection.

This test is not covered by the Medicare Benefits Schedule. The patient will be responsible for the cost of the test and will be sent a bill directly from the referral laboratory.

A "Consent for Payment" form must be signed by the patient before collection. Please note: This consent form is not required for hospital inpatients or clinical trials patients.

The current cost of the test is $28 (as of 19/03/2025). Please note that this may change.

A dedicated tube is required for this test.

 

This test is no longer available. Please contact the Immunopathologist on-call or the Immunology Laboratory for any questions.

FrequencyOn requestNot applicable

 Recent changes for KARYOTYPE - BLOOD

Recent changes for KARYOTYPE - BLOOD
DateFieldChanged FromChanged To
25th March 2025Assay nameCHROMOSOME STUDIES - BLOOD (CONSTITUTIONAL)KARYOTYPE - BLOOD
Alternative namesKARYOTYPE - BLOOD, G-bandCHROMOSOME STUDIES - BLOOD (CONSTITUTIONAL), G-band

 Recent changes for MEASLES SEROLOGY

Recent changes for MEASLES SEROLOGY
DateFieldChanged FromChanged To
14th April 2025Alternative namesMeasles IgG (Screening for immunity) Measles IgG and IgM (Clinical infection i.e. rash, fever)Measles IgG Measles IgG and IgM
14th April 2025Alternative namesMeasles IgG, Measles IgG and IgMMeasles IgG (Screening for immunity) Measles IgG and IgM (Clinical infection i.e. rash, fever)

 Recent changes for MPOX PCR

Recent changes for MPOX PCR
DateFieldChanged FromChanged To
20th November 2024Assay nameMonkeypox Virus PCRMPOX PCR
Alternative namesMonkey Pox Virus PCR, Orthopoxvirus monkeypox PCR
Volume (Adults)null mL
Minimum/Paediatric Volumenull mL

 Recent changes for MYOTONIC DYSTROPHY type 1 and type 2

Recent changes for MYOTONIC DYSTROPHY type 1 and type 2
DateFieldChanged FromChanged To
9th December 2024Assay nameMYOTONIC DYSTROPHYMYOTONIC DYSTROPHY type 1 and type 2
Alternative namesDMPK, CTG Triplet repeats, DM1DMPK, CTG Triplet repeats, DM1, DM2

 Recent changes for PENICILLIN G

Recent changes for PENICILLIN G
DateFieldChanged FromChanged To
14th February 2025Alternative namesBENZYLPENICILLIN
Request GroupnonePENEG1
Volume (Adults)5 mL1 mL
Preferred Specimen TypeRefer to collection instructionsBlood
Preferred Container TypeRefer to collection instructionsHeparin Plasma (No Gel)
Optional Container TypeSerum (No Gel)
EDTA Plasma

 Recent changes for placenta histopathology

Recent changes for placenta histopathology
DateFieldChanged FromChanged To
15th December 2024Volume (Adults)null mL
Minimum/Paediatric Volumenull mL
Collection & Request Instructions

Should microbiology be required, take swabs before sending the specimen to histopathology.

As of 1st Janaury 2025 a 'Placenta Pathology: Information for Request' from must be completed and arrive with the specimen.

Should microbiology be required, take swabs before sending the specimen to histopathology.

As of 1st Janaury 2025 a 'Placenta Pathology: Information for Request' from must be completed and sent with the specimen. Specimens without this form will not be accepted for testing.

15th December 2024Volume (Adults)null mL
Minimum/Paediatric Volumenull mL
Collection & Request Instructions

Should microbiology be required, take swabs before sending the specimen to histopathology

Should microbiology be required, take swabs before sending the specimen to histopathology.

As of 1st Janaury 2025 a 'Placenta Pathology: Information for Request' from must be completed and arrive with the specimen.

 Recent changes for PLATELET AGGREGATION STUDIES

Recent changes for PLATELET AGGREGATION STUDIES
DateFieldChanged FromChanged To
14th February 2025Alternative namesPLATELET FUNCTION TESTSPLATELET FUNCTION TEST
Volume (Adults)null mL
Minimum/Paediatric Volumenull mL
Collection & Request Instructions

(a) Full platelet aggregation studies must be approved by a haematologist. 

(b) Only available at Clayton Campus from 9am - 1pm, Mon-Fri, MUST BE BOOKED IN ADVANCE WITH LAB OTHERWISE MAY NOT BE PERFORMED (Phone 95946751) 

(c) Tests for Paitents <1 year old must be approved by Paediactric Haematologist.

(d) Blood collection - Patient ; Collect 4 X 3.5 mL Citrate tubes - Controls ; Collect 3 x 3.5 mL Citrate tubes on a donor staff member (no medication during last 7 days). Place 'do not spin' stickers on the tube. Not to be sent via pneumatic tube.

Not suitable for pre-registration

(A) Only available at Clayton Campus. THIS TEST MUST BE BOOKED IN ADVANCE WITH THE LAB. Please phone 9594 6751 BEFORE COLLECTION to ensure patient is booked.

(B) ALL REQUESTS FOR PLATELET AGGREGATION STUDIES (not PFA screening) IN PATIENTS <18yr MUST BE APPROVED BY A HAEMATOLOGIST PRIOR TO COLLECTION. Contact Haematology Laboratory Registrars on 9594 4340.

(C) Blood collection - Patient: Collect 4 x 3.5 mL Citrate tubes. Controls: Collect 3 x 3.5 mL Citrate tubes on a donor staff member (no medication during last 10 days). Place 'do not spin' stickers on the tube. Not to be sent via pneumatic tube.

Not suitable for pre-registration.

 Recent changes for POSACONAZOLE

Recent changes for POSACONAZOLE
DateFieldChanged FromChanged To
8th November 2024Collection & Request InstructionsCollect immediately pre dose
Collection & Request Instructions

Record date and time of last dose on request form.

DEDICATED EDTA REQUIRED.

Collect a trough sample (pre-dose) each time.

When to monitor posaconazole level?

Blood samples should be taken when a steady state has reached.

For oral dose: 7-10 days after starting/changing therapy.

For IV:  5 days after starting or making a dose change.

 

Refer to Monash PROMPT posaconazole guideline for details: 

Posaconazole Paediatric Medication Profile

Posaconazole Adult Medication Profile

 

This is a Sendout test with turnaround times 3 x weekly. For urgent tests please phone the laboratory

 

 

 Recent changes for PROTEIN S ASSAY

Recent changes for PROTEIN S ASSAY
DateFieldChanged FromChanged To
10th April 2025Request GroupPROTSPROTSF

 Recent changes for SARS-CoV-2 Serology

Recent changes for SARS-CoV-2 Serology
DateFieldChanged FromChanged To
28th January 2025Request GroupWCVCOVSER
Collection & Request Instructions

Serology for COVID-19 should only be ordered with appropriate clinical presentation. Please refer to Public Health Laboratory Network Guidance for serological testing in COVID-19 or contact the Microbiology registrar to discuss.

https://www.health.gov.au/sites/default/files/documents/2020/08/phln-guidance-for-serological-testing-in-covid-19-phln-guidance-on-serological-testing-in-covid-19.pdf

FrequencyOn requestNot applicable

 Recent changes for sFlt-1/PLGF ratio

Recent changes for sFlt-1/PLGF ratio
DateFieldChanged FromChanged To
6th January 2025Minimum/Paediatric Volumenull mL

 Recent changes for Spinocerebellar ataxia (SCA) Panel Test

Recent changes for Spinocerebellar ataxia (SCA) Panel Test
DateFieldChanged FromChanged To
9th December 2024Alternative namesSpinocerebellar Ataxia Type 1, 2, 3, 6, 7, 12, 17Spinocerebellar Ataxia Type 1, Spinocerebellar Ataxia Type 2, Spinocerebellar Ataxia Type 3, Spinocerebellar Ataxia Type 6, Spinocerebellar Ataxia Type 7, Spinocerebellar Ataxia Type 12, Spinocerebellar Ataxia Type 17
9th December 2024Assay nameSpinocerebellar ataxia 1,2,3,6,7Spinocerebellar ataxia (SCA) Panel Test
Alternative namesCACNA1A, ATXN7, ATXN3, ATXN2, ATXN1Spinocerebellar Ataxia Type 1, 2, 3, 6, 7, 12, 17

 Recent changes for T CELL PROLIFERATION

Recent changes for T CELL PROLIFERATION
DateFieldChanged FromChanged To
24th December 2024Collection & Request Instructions

Specimens must be collected between the hours of 2pm on Mondays to 8.30am on Tuesdays and sent immediately to Clayton Pathology Reception for courier to reach The Royal Children's Hospital before 11am on Tuesdays only, no later than 24 hours from collection. 

Please note, this test is indicated for the exclusion of primary immunodeficiency only. Reconsider ordering in the context of organ transplantation or secondary immunodeficiency, including patients on immunosuppressants. 

Please note, this test is indicated for the exclusion of primary immunodeficiency only. Reconsider ordering in the context of organ transplantation or secondary immunodeficiency, including patients on immunosuppressants.

This test is only performed on Tuesday, with special collection and transport requirements. Please liaise with the Immunopathologist On-call prior to request or collection.

 Recent changes for TRYPTASE

Recent changes for TRYPTASE
DateFieldChanged FromChanged To
16th April 2025Volume (Adults)5 mL2 mL
Minimum/Paediatric Volume2 mL1 mL
Collection & Request Instructions

Sample should be collected between 15 minutes and 3 hours after the suspected anaphylactic event.

Increased levels of Tryptase can normally be detected up to 3 to 6 hours after the anaphylactic reaction. Levels return to normal within 12—14 hours after release.

For acute settings, to help in the diagnosis of anaphylaxis, samples should be collected between 30 minutes and 4 hours after the suspected anaphylactic event. Where possible, a baseline sample is also recommended, for collection at least 24-48 hours following resolution of all allergic symptoms.

For the exclusion or monitoring of mast cell disorders, samples are best collected more than one week after resolution of any suspected allergic events.

Please note that sample viability is 7 days at 4oC, and 24 hours at room temperature. Add-on requests beyond this time frame are not possible.

9th April 2025Request GroupTTASE1TTASE2

 Recent changes for URINE FOR MICROSCOPY & CULTURE

Recent changes for URINE FOR MICROSCOPY & CULTURE
DateFieldChanged FromChanged To
7th November 2024Alternative namesUMCS, MSU, ABU, ASYMPOMATIC BACTERIURIA URINE, URINE RED CELL MORPHOLOGY, URINE FOR FEMU, casts, dysmorphic RBCsUMC, MSU, ABU, ASYMPOMATIC BACTERIURIA URINE, URINE RED CELL MORPHOLOGY, URINE FOR FEMU, casts, dysmorphic RBCs
Volume (Adults)null mL
Minimum/Paediatric Volumenull mL

 Recent changes for WARFARIN ASSAY

Recent changes for WARFARIN ASSAY
DateFieldChanged FromChanged To
24th March 2025Minimum/Paediatric Volumenull mL
Uncontrolled when downloaded or printed.
Date printed: 20th April, 2025 09:02:40